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GEOG 591 - GIS for Health

This is a sample syllabus.

This sample syllabus is a representative example of the information and materials included in this course. Information about course assignments, materials, and dates listed here is subject to change at any time. Definitive course details and materials will be available in the official course syllabus, in Canvas, when the course begins.

Overview

This course focuses on the growing role of geospatial science and analysis in understanding human health and well-being. These fields of study combine several related and established geospatial approaches while incorporating emerging perspectives and tools from data science and machine learning.

This comes at a time when society is experiencing intense pressure on human health and well-being and the provisioning of adequate health and social support. For example, adverse health risks and impacts of climate change are accelerating, including more intense heat waves and other extreme weather, changing distributions of mosquito-borne disease, longer and more intense hurricane seasons, and other, more general effects on well-being and quality of life. There are other existing and new threats, such as the disease burden of malaria and emerging diseases such as COVID-19. Geospatial science and analysis aids our understanding of and can help identify solutions across this complex health and wellbeing landscape through the integration of a range of disciplines, datasets, and methods.

The course covers relevant techniques for analyzing health phenomena, such as methods for detecting areas of higher risk of disease and cartographic techniques for visualizing geospatial health data. The course also provides a foundation in relevant concepts from public health, epidemiology, and social medicine, and focuses on their geographic dimensions and diverse types of study design. Concepts and techniques are explained through weekly lessons, practical activities, and a term project. The approaches introduced are often mathematically complex, but the emphasis is on the choice and application of appropriate methods for the analysis of health and disease often encountered in applied geography as well as on developing a framework in which to approach the analysis. Topics range across data surveillance and infrastructure planning, modeling vector-borne diseases, planning for recovery through an evaluation of healthcare accessibility, cluster analysis, predicting health outcomes, and responding to outbreaks and epidemics.

Weekly projects are hands-on, using geographic information systems or other appropriate computational tools, so that students appreciate the practical complexities involved but also develop an understanding of the limitations of these methods. The term project is intended to allow students to formulate a research problem in a topic area of their choosing, to gather and organize appropriate available datasets, and to understand how different methods covered in the course can be applied in combination to thoroughly explore real questions. Students will be asked to engage with their peers' work during the project planning stage.

Objectives

This course has four main learning objectives:

  1. Subject Matter Objective: Public Health - Demonstrate a solid foundation of theory and practice in public health, epidemiology, and social medicine from a geographical perspective.
  2. Subject Matter Objective: Geospatial Analysis - Utilize Geospatial Analysis approaches, data issues, assumptions, and requirements to apply specific methods.
  3. Research Design and Critical Thinking Objective - Identify researchable questions, identify data requirements, and select appropriate geospatial and SDS methods and techniques.
  4. Communication Objective - Synthesize information and present findings for different audiences.

By the end of this class, students will be able to:

  • Critically evaluate contemporary developments in health from a spatial analysis perspective both in research and applied contexts.
  • Explain the issues involved in representing people, their health, and potential explanatory factors.
  • Critically evaluate the evidence for and against causal relationships between health outcomes and environmental factors.
  • Explain the relative roles of individual-level effects and area-level effects (or composition and context) in influencing patterns of health and the role that SDS can play in exploring these.
  • Discuss the role of geospatial analyses of health alongside a range of complementary approaches from related fields.
  • Use geospatial tools to identify spatial patterns in health and to undertake an exploratory analysis of potential explanatory factors.
  • Select and apply analytical methods for mapping, modeling, and analyzing health and disease, including point pattern analysis, surface analysis, overlay analysis, network analysis, cluster, and regression analysis.
     

Required Materials

The materials listed here represent those that may be included in this course. Students will find a definitive list in the course syllabus, in Canvas, when the course begins.

Required Materials

The following required reading materials must be purchased:

Quammen, D. (2012). Spillover: Animal infections and the next human pandemic. 1st Edition. ISBN-13: 978-0393346619.

Quammen, D. (2023). Breathless: The scientific race to defeat a deadly virus. Simon and Schuster.

The following required reading materials are available via the Penn State Library as free downloads:

Garg, P. K., Tripathi, N. K., Kappas, M., & Gaur, L. (Eds.) (2022). Geospatial data science in healthcare for society 5.0. Springer.

Faruque, F.S. (eds) (2022). Geospatial technology for human well-being and health. Springer, Cham.

Bonita, R., Beaglehole, R., Kjellstrom, T. (2006). Basic epidemiology, 2nd Ed. World Health Organization (WHO), Geneva, Switzerland. Pp 219.

CDC (2012). Principles of epidemiology in public health practice, 3rd Ed. U.S. Department of Health and Human Services, Centers for Disease Control and Prevention, Atlanta, USA. Pp 500.

Recommended Materials (Optional):

Anselin, L. (2024). An introduction to spatial data science with GeoDa - Volume 1 and 2. ISBN 9781032713397.

Pebesma, E., & Bivand, R. (2023). Spatial data science: With applications in R. Chapman and Hall/CRC. ISBN 13: 978-1032713397.

Specific Technology Requirements

You will need ArcGIS Online (AGOL) and ArcGIS Pro. If you are a Windows user, see GIS @ Penn State for installation instructions. If you are a Mac user, see Run ArcGIS Pro on a Mac for instructions.

Prerequisites

There are no prerequisites or concurrent courses.

Expectations

Like any graduate-level course, you will be challenged to move beyond the knowledge and skills you bring to the class. However, you'll be glad to know you don't have to show up for the class at a certain time! All you need to do is complete your assignments before the published deadlines. Some of the assignments are one week in length, while others are two.

During the term, I encourage everyone to use the class discussion forums, chat rooms, or email to help each other find materials related to the course content. I can always be contacted via class email and will check my account daily during the week (and typically at least once each weekend). If I am traveling, I may check somewhat less frequently, but I will alert you of this beforehand.

My colleagues and I have worked hard to make this the most effective and convenient educational experience possible. How much and how well you learn is ultimately up to you. You will succeed if you are diligent about keeping up with the class schedule and if you take advantage of opportunities to communicate with me, as well as with your fellow students.

For a more detailed look at what will be covered in each lesson, and due dates for our assignments and activities, please refer to the semester-specific course schedule that is part of this syllabus (see "Course Schedule").

Major Assignments

Students earn grades that reflect the extent to which they achieve the learning objectives listed above. Opportunities to demonstrate learning include the following, and grades will be based on points assigned to each of several components of the course as follows:

Lesson Quizzes: 20% of total course grade

Analysis Projects: 50% of total course grade

Term Project: 25% of total course grade

Discussion Participation: 5% of total course grade

Course Schedule

 
Course Schedule
LessonWeekTopicAssignments
11Introduction to Health Geography 
  • Lesson 1 Quiz 
  • Lesson 1 Analysis Project
  • Lesson 1 Term Project: Initial Project Ideas
  • Lesson 1 Reading Discussion
22Introduction to Spatial Data Science 
  • Lesson 2 Quiz
  • Lesson 2 Term Project: Project Overview
  • Lesson 2 Reading Discussion
33 & 4Investigating Health and Public Health Crises
  • Lesson 3 Quizzes (Part 1 and Part 2)
  • Lesson 3 Analysis Project
  • Lesson 3 Term Project Proposal: Draft Paper- Peer Review
  • Lesson 3 Reading Discussion
45 & 6Investigating Infectious and Communicable Disease Outbreaks
  • Lesson 4 Quizzes (Part 1 and  Part 2)
  • Lesson 4 Analysis Project
  • Lesson 4 (Part 1) Term Project: Peer Review Process
  • Lesson 4 (Part 2) Term Project: Paper Development
  • Lesson 4 Reading Discussion
57 & 8Investigating Social and Environmental Determinants of Health
  • Lesson 5 Quiz
  • Lesson 5 Analysis Project
  • Lesson 5 Term Project: Continued Paper Development
  • Lesson 5 Reading Discussion
69 & 10Public Health Prevention and Response as a Complex System
  • Lesson 6 Quiz
  • Lesson 6 Analysis Project
  • Lesson 6 Term Project: Final Project Submission
  • Lesson 6 Reading Discussion